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1

Partial freezing: A nature-inspired strategy for organ banking

Tessier, Shannon N., Cronin, Stephanie E.J., Pendexter, Casie A., Özer, Sinan, de Vries, Reinier J., Nagpal, Sonal, Banik, Peony D., Uygun, Korkut, Toner, Mehmet

Journal:

Année:

2018

Langue:

english

Fichier:

PDF, 45 KB

english, 2018

2

Whole-Organ Tissue Engineering: Decellularization and Recellularization of Three-Dimensional Matrix Scaffolds

Badylak, Stephen F., Taylor, Doris, Uygun, Korkut

Journal:

Annual Review of Biomedical Engineering

Année:

2011

Langue:

english

Fichier:

PDF, 430 KB

english, 2011

3

Political Islam Islamic Political Culture, Democracy, and Human Rights: A Comparative Study Daniel E. Price Moderate and Radical Islamic Fundamentalism: The Quest for Modernity, Legitimacy, and the Islamic State Ahmad S. Moussalli

Bruinsma, Bote G., Yarmush, Martin L., Uygun, Korkut

Journal:

Journal of Palestine Studies

Année:

2000

Langue:

english

Fichier:

PDF, 509 KB

english, 2000

4

Tissue Growth Modeling in a Wavy-Walled Bioreactor

Bilgen, Bahar, Uygun, Korkut, Bueno, Ericka M., Sucosky, Philippe, Barabino, Gilda A.

Journal:

Tissue Engineering Part A

Année:

2009

Langue:

english

Fichier:

PDF, 31.67 MB

english, 2009

5

Leveraging machine perfusion for whole organ preservation using partial freezing

Cronin, Stephanie E.J., Pendexter, Casie A., de Vries, Reinier J., Özer, Sinan, Banik, Peony D., Nagpal, Sonal, Tessier, Shannon N., Uygun, Korkut, Toner, Mehmet

Journal:

Année:

2018

Langue:

english

Fichier:

PDF, 53 KB

english, 2018

6

Effect of ice nucleation and cryoprotectants during high subzero preservation in endothelialized microchannels

Tessier, Shannon N., Weng, Lindong, Moyo, Will D., Au, Sam H., Wong, Keith H. K., Angpraseuth, Cindy, Stoddard, Amy E., Lu, Chenyue, Nieman, Linda T., Sandlin, Rebecca, Uygun, Korkut, Stott, Shannon L

Journal:

ACS Biomaterials Science & Engineering

Année:

2018

Langue:

english

Fichier:

PDF, 1.26 MB

english, 2018

7

Bulk droplet vitrification: an approach to improve large-scale hepatocyte cryopreservation outcome

de Vries, Reinier J, Banik, Peony D., Nagpal, Sonal, Weng, Lindong, Ozer, Sinan, van Gulik, Thomas M., Toner, Mehmet, Tessier, Shannon N., Uygun, Korkut

Journal:

Année:

2018

Langue:

english

Fichier:

PDF, 1.06 MB

english, 2018

8

Fast process security assessment theory

Korkut Uygun, Yinlun Huang, Helen H. Lou

Journal:

Année:

2004

Langue:

english

Fichier:

PDF, 183 KB

english, 2004

9

HEN optimizations without using logarithmic-mean-temperature difference

Uğur Akman, Korkut Uygun, Derya Uztürk, Alp Er Ş. Konukman

Journal:

Année:

2002

Langue:

english

Fichier:

PDF, 271 KB

english, 2002

10

Process security analysis: γ-Analysis and σ-map

Korkut Uygun, Yinlun Huang, Helen H. Lou

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 355 KB

english, 2003

11

Investigation of metabolic objectives in cultured hepatocytes

Korkut Uygun, Howard W.T. Matthew, Yinlun Huang

Journal:

Biotechnology and Bioengineering

Année:

2007

Langue:

english

Fichier:

PDF, 362 KB

english, 2007

12

In situ metabolic flux analysis to quantify the liver metabolic response to experimental burn injury

Maria-Louisa Izamis, Nripen S. Sharma, Basak Uygun, Robert Bieganski, Nima Saeidi, Yaakov Nahmias, Korkut Uygun, Martin L. Yarmush, Francois Berthiaume

Journal:

Biotechnology and Bioengineering

Année:

2011

Langue:

english

Fichier:

PDF, 1.72 MB

english, 2011

13

A novel 3D liver organoid system for elucidation of hepatic glucose metabolism

Yanhua Lu, Guoliang Zhang, Chong Shen, Korkut Uygun, Martin L. Yarmush, Qin Meng

Journal:

Biotechnology and Bioengineering

Année:

2012

Langue:

english

Fichier:

PDF, 337 KB

english, 2012

14

Optimization-based metabolic control analysis

Korkut Uygun, Basak Uygun, Howard W. T. Matthew, Yinlun Huang

Journal:

Biotechnology Progress

Année:

2010

Langue:

english

Fichier:

PDF, 318 KB

english, 2010

15

A path constrained method for integration of process design and control

Jigar Patel, Korkut Uygun, Yinlun Huang

Journal:

Computers & Chemical Engineering

Année:

2008

Langue:

english

Fichier:

PDF, 721 KB

english, 2008

16

High-throughput single cell arrays as a novel tool in biopreservation

Kenneth L. Roach, Kevin R. King, Korkut Uygun, Steven C. Hand, Isaac S. Kohane, Martin L. Yarmush, Mehmet Toner

Journal:

Année:

2009

Langue:

english

Fichier:

PDF, 589 KB

english, 2009

17

Subnormothermic Machine Perfusion at Both 20°C and 30°C Recovers Ischemic Rat Livers for Successful Transplantation

Herman Tolboom, Maria-Louisa Izamis, Nripen Sharma, Jack M. Milwid, Basak Uygun, François Berthiaume, Korkut Uygun, Martin L. Yarmush

Journal:

Journal of Surgical Research

Année:

2012

Langue:

english

Fichier:

PDF, 1.79 MB

english, 2012

18

Application of whole-organ tissue engineering in hepatology

Uygun, Basak E., Yarmush, Martin L., Uygun, Korkut

Journal:

Nature Reviews Gastroenterology and Hepatology (formerly Nature Clinical Practice Gastroenterology and Hepatology)

Année:

2012

Langue:

english

Fichier:

PDF, 268 KB

english, 2012

19

A fitness index for transplantation of machine-perfused cadaveric rat livers

Sinem Perk, Maria-Louisa Izamis, Herman Tolboom, Basak Uygun, Martin L Yarmush, Korkut Uygun

Journal:

BMC Research Notes

Année:

2012

Langue:

english

Fichier:

PDF, 456 KB

english, 2012

20

A simplified subnormothermic machine perfusion system restores ischemically damaged liver grafts in a rat model of orthotopic liver transplantation

Berendsen, Tim A, Bruinsma, Bote G, Lee, Jungwoo, D’Andrea, Vincent, Liu, Qiang, Izamis, Maria-Louisa, Uygun, Korkut, Yarmush, Martin L

Journal:

Transplantation Research

Année:

2012

Langue:

english

Fichier:

PDF, 659 KB

english, 2012

21

Decellularization and Recellularization of Whole Livers

Uygun, Basak E., Price, Gavrielle, Saedi, Nima, Izamis, Maria-Louisa, Berendsen, Tim, Yarmush, Martin, Uygun, Korkut

Journal:

Journal of Visualized Experiments

Année:

2011

Langue:

english

Fichier:

PDF, 414 KB

english, 2011

22

Injury to peribiliary glands and vascular plexus before liver transplantation predicts formation of non-anastomotic biliary strictures

op den Dries, Sanna, Westerkamp, Andrie C., Karimian, Negin, Gouw, Annette S.H., Bruinsma, Bote G., Markmann, James F., Lisman, Ton, Yeh, Heidi, Uygun, Korkut, Martins, Paulo N., Porte, Robert J.

Journal:

Journal of Hepatology

Année:

2014

Langue:

english

Fichier:

PDF, 2.28 MB

english, 2014

23

Whole liver engineering

Uygun, Basak E., Kim, Yeonhee, Berendsen, Tim, Ozer, Sinan, Yarmush, Martin L., Uygun, Korkut

Journal:

New Biotechnology

Année:

2012

Langue:

english

Fichier:

PDF, 60 KB

english, 2012

24

A Model for Normothermic Preservation of the Rat Liver

Tolboom, Herman, Pouw, Roos, Uygun, Korkut, Tanimura, Yoko, Izamis, Maria-Louisa, Berthiaume, François, Yarmush, Martin L.

Journal:

Tissue Engineering

Année:

2007

Langue:

english

Fichier:

PDF, 3.89 MB

english, 2007

25

Supercooling enables long-term transplantation survival following 4 days of liver preservation

Berendsen, Tim A, Bruinsma, Bote G, Puts, Catheleyne F, Saeidi, Nima, Usta, O Berk, Uygun, Basak E, Izamis, Maria-Louisa, Toner, Mehmet, Yarmush, Martin L, Uygun, Korkut

Journal:

Nature Medicine

Année:

2014

Langue:

english

Fichier:

PDF, 481 KB

english, 2014

26

DFBA-LQR: An Optimal Control Approach to Flux Balance Analysis

Uygun, Korkut, Matthew, Howard W. T., Huang, Yinlun

Journal:

Industrial & Engineering Chemistry Research

Année:

2006

Langue:

english

Fichier:

PDF, 255 KB

english, 2006

27

ENVIRONMENTALLY CONSCIOUS HOIST SCHEDULING FOR ELECTROPLATING FACILITIES

Kuntay, Isik, Xu, Qiang, Uygun, Korkut, Huang, Yinlun

Journal:

Chemical Engineering Communications

Année:

2006

Langue:

english

Fichier:

PDF, 280 KB

english, 2006

28

Organomatics and organometrics: Novel platforms for long-term whole-organ culture

Bruinsma, Bote G., Yarmush, Martin L., Uygun, Korkut

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 1001 KB

english, 2014

29

Supercooling preservation and transplantation of the rat liver

Bruinsma, Bote G, Berendsen, Tim A, Izamis, Maria-Louisa, Yeh, Heidi, Yarmush, Martin L, Uygun, Korkut

Journal:

Nature Protocols

Année:

2015

Langue:

english

Fichier:

PDF, 955 KB

english, 2015

30

Surgical models of Roux-en-Y gastric bypass surgery and sleeve gastrectomy in rats and mice

Bruinsma, Bote G, Uygun, Korkut, Yarmush, Martin L, Saeidi, Nima

Journal:

Nature Protocols

Année:

2015

Langue:

english

Fichier:

PDF, 2.02 MB

english, 2015

31

Machine perfusion enhances hepatocyte isolation yields from ischemic livers

Izamis, Maria-Louisa, Perk, Sinem, Calhoun, Candice, Uygun, Korkut, Yarmush, Martin L., Berthiaume, François

Journal:

Année:

2015

Langue:

english

Fichier:

PDF, 966 KB

english, 2015

32

Effects of Burn Injury on Markers of Hypermetabolism in Rats

Izamis, Maria-Louisa, Uygun, Korkut, Uygun, Basak, Yarmush, Martin L., Berthiaume, François

Journal:

Journal of Burn Care & Research

Année:

2009

Langue:

english

Fichier:

PDF, 703 KB

english, 2009

33

Simple Machine Perfusion Significantly Enhances Hepatocyte Yields of Ischemic and Fresh Rat Livers

Izamis, Maria-Louisa, Calhoun, Candice, Uygun, Basak E., Guzzardi, Maria Angela, Price, Gavrielle, Luitje, Martha, Saeidi, Nima, Yarmush, Martin L., Uygun, Korkut

Journal:

Année:

2013

Langue:

english

Fichier:

PDF, 716 KB

english, 2013

34

Recovery of Warm Ischemic Rat Liver Grafts by Normothermic Extracorporeal Perfusion

Tolboom, Herman, Pouw, Roos E., Izamis, Maria-Louisa, Milwid, Jack M., Sharma, Nripen, Soto-Gutierrez, Alejandro, Nahmias, Yaakov, Uygun, Korkut, Berthiaume, François, Yarmush, Martin L.

Journal:

Transplantation Journal

Année:

2009

Langue:

english

Fichier:

PDF, 1.37 MB

english, 2009

35

Nuclear receptors control pro-viral and antiviral metabolic responses to hepatitis C virus infection

Levy, Gahl, Habib, Naomi, Guzzardi, Maria Angela, Kitsberg, Daniel, Bomze, David, Ezra, Elishai, Uygun, Basak E, Uygun, Korkut, Trippler, Martin, Schlaak, Joerg F, Shibolet, Oren, Sklan, Ella H, Cohen

Journal:

Nature Chemical Biology

Année:

2016

Langue:

english

Fichier:

PDF, 1.72 MB

english, 2016

36

Cell Delivery: From Cell Transplantation to Organ Engineering

Soto-Gutierrez, Alejandro, Yagi, Hiroshi, Uygun, Basak E., Navarro-Alvarez, Nalu, Uygun, Korkut, Kobayashi, Naoya, Yang, Yong-Guang, Yarmush, Martin L.

Journal:

Cell Transplantation

Année:

2010

Langue:

english

Fichier:

PDF, 584 KB

english, 2010

37

Liver ex-vivo machine perfusion preservation: A review of the methodology and results of large animal studies and clinical trials

Marecki, Hazel, Bozorgzadeh, Adel, Porte, Robert, Leuvenink, Henri, Uygun, Korkut, Martins, Paulo

Journal:

Liver Transplantation

Année:

2017

Langue:

english

Fichier:

PDF, 3.06 MB

english, 2017

38

Peritransplant energy changes and their correlation to outcome after human liver transplantation

Bruinsma, Bote G., Avruch, James H., Sridharan, Gautham V., Weeder, Pepijn D., Jacobs, Marie Louise, Crisalli, Kerry, Amundsen, Beth, Porte, Robert J., Markmann, James F., Uygun, Korkut, Yeh, Heidi

Journal:

Transplantation Journal

Année:

2017

Langue:

english

Fichier:

PDF, 1.77 MB

english, 2017

39

Subzero organ preservation

Bruinsma, Bote G., Uygun, Korkut

Journal:

Current Opinion in Organ Transplantation

Année:

2017

Langue:

english

Fichier:

PDF, 302 KB

english, 2017

40

2517: Ex-vivo subnormothermic oxygenated machine perfusion of swine forelimbs enables prolonged graft preservation prior to transplantation

Lellouch, Alexandre Gaston, Karimian, Negin, Ng, Zhi Yang, Mert, Safak, Geerts, Sharon, Uygun, Korkut, Cetrulo, Curtis L.

Journal:

Vascularized Composite Allotransplantation

Année:

2016

Langue:

english

Fichier:

PDF, 535 KB

english, 2016

41

Abstract

Lellouch, Alexandre G., Karimian, Negin, Yang Ng, Zhi, Mert, Safak, Geerts, Sharon, Uygun, Korkut, Cetrulo, Curtis L.

Journal:

Plastic and Reconstructive Surgery Global Open

Année:

2016

Langue:

english

Fichier:

PDF, 273 KB

english, 2016

42

Ex Situ Normothermic Machine Perfusion of Donor Livers

Karimian, Negin, Matton, Alix P.M., Westerkamp, Andrie C., Burlage, Laura C., op den Dries, Sanna, Leuvenink, Henri G.D., Lisman, Ton, Uygun, Korkut, Markmann, James F., Porte, Robert J.

Journal:

Journal of Visualized Experiments

Année:

2015

Langue:

english

Fichier:

PDF, 479 KB

english, 2015

43

Multi-omic network-based interrogation of rat liver metabolism following gastric bypass surgery featuring SWATH proteomics

Sridharan, Gautham Vivek, D’Alessandro, Matthew, Bale, Shyam Sundhar, Bhagat, Vicky, Gagnon, Hugo, Asara, John M., Uygun, Korkut, Yarmush, Martin L., Saeidi, Nima

Journal:

Année:

2017

Langue:

english

Fichier:

PDF, 2.76 MB

english, 2017

44

A Highly-Occupied, Single-Cell Trapping Microarray for Determination of Cell Membrane Permeability

Weng, Lindong, Ellett, Felix, Edd, Jon, Wong, Keith, Uygun, Korkut, Irimia, Daniel, Stott, Shannon L., Toner, Mehmet

Journal:

Année:

2017

Langue:

english

Fichier:

PDF, 1.76 MB

english, 2017

45

Functional Human Liver Preservation and Recovery by Means of Subnormothermic Machine Perfusion

Bruinsma, Bote G., Avruch, James H., Weeder, Pepijn D., Sridharan, Gautham V., Uygun, Basak E., Karimian, Negin G., Porte, Robert J., Markmann, James F., Yeh, Heidi, Uygun, Korkut

Journal:

Journal of Visualized Experiments

Année:

2015

Langue:

english

Fichier:

PDF, 283 KB

english, 2015

46

A novel model for ex situ reperfusion of the human liver following subnormothermic machine perfusion

Avruch, James H., Bruinsma, Bote G., Weeder, Pepijn D., Sridharan, Gautham V., Porte, Robert J., Yeh, Heidi, Markmann, James F., Uygun, Korkut

Journal:

Année:

2017

Langue:

english

Fichier:

PDF, 688 KB

english, 2017

47

AIP Conference Proceedings [Author(s) II. INTERNATIONAL CONFERENCE ON ADVANCES IN NATURAL AND APPLIED SCIENCES: ICANAS 2017 - Antalya, Turkey (18–21 April 2017)] - Bullen-type and Simpson-type inequalities for fractional integrals with applications

Set, Erhan, Korkut, Necla, Uygun, Nazlı

Année:

2017

Langue:

english

Fichier:

PDF, 199 KB

english, 2017

48

Hacking temperature to extend and enhance preservation

Journal:

Année:

2018

Langue:

english

Fichier:

PDF, 45 KB

english, 2018

49

Intracardiac cooling for cryopreservation of the heart

de Vries, Reinier J., Detelich, Danielle, Özer, Sinan, Uygun, Korkut

Journal:

Année:

2018

Langue:

english

Fichier:

PDF, 68 KB

english, 2018

50

A Metabolic Index of Ischemic Injury for Perfusion-Recovery of Cadaveric Rat Livers

Perk, Sinem, Izamis, Maria-Louisa, Tolboom, Herman, Uygun, Basak, Berthiaume, Francois, Yarmush, Martin L., Uygun, Korkut, Androulakis, Ioannis P.

Journal:

Année:

2011

Langue:

english

Fichier:

PDF, 1007 KB

english, 2011